National Cancer Institute Thesaurus

Last uploaded: February 21, 2019
Preferred Name

Erythroid Transcription Factor

ID

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17493

code

C17493

DEFINITION

Erythroid transcription factor (413 aa, ~43 kDa) is encoded by the human GATA1 gene. This protein is involved in transcription and erythropoiesis.

DesignNote

Encoded by human GATA1 Gene (GATA Family), 413-aa 42.8-kD tissue-specific transcriptional activator GATA-1, a general switch factor for erythroid/megakaryocyte development, contains a conserved central domain of 2 GATA/C4 zinc fingers that recognize the WGATAR motif. The fingers cooperate in specific binding of the consensus DNA sequence (A/T)GATA(A/G) in erythroid genes. The N-finger interacts with zinc finger FOG1 protein, also essential for erythroid/megakaryocyte development. V205M abrogates GATA1 N-finger interaction with FOG. Regulatory feedback by death-receptor ligands results in caspase-mediated GATA1 degradation and impaired erythroblast development. Arg216gly substitution in the GATA1 N-finger causes X-linked thrombocytopenia; reduces GATA1/FOG1 affinity for palindromic GATA sites. (LocusLink, Swiss-Prot, OMIM)

Erythroid transcription factor binds to DNA sites with the consensus sequence [AT]GATA[AG] within regulatory regions of globin genes and of other genes expressed in erythroid cells. (UniProt)

FULL_SYN

NF-E1 DNA-Binding Protein

GATA1

Globin Transcription Factor 1

ERYF1

NFE1

GF-1

GATA Binding Protein 1

GATA-1

GF1

Transcription Factor GATA1

Erythrold Transcription Factor 1

label

Erythroid Transcription Factor

Legacy_Concept_Name

GATA-1

OMIM_Number

305371

Preferred_Name

Erythroid Transcription Factor

prefixIRI

C17493

prefLabel

Erythroid Transcription Factor

Semantic_Type

Biologically Active Substance

Amino Acid, Peptide, or Protein

Swiss_Prot

P15976

UMLS_CUI

C1530719

subClassOf

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17207

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http://purl.obolibrary.org/obo/PR_000007857 Phenotypic Quality Ontology LOOM
http://purl.obolibrary.org/obo/PR_000007857 Cell Ontology LOOM
http://purl.obolibrary.org/obo/PR_000007857 Protein Ontology LOOM
http://purl.obolibrary.org/obo/PR_000007857 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) LOOM