National Cancer Institute Thesaurus

Last uploaded: February 21, 2019
Preferred Name

Prothrombin

ID

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C82854

code

C82854

DEFINITION

Prothrombin (622 aa, ~70 kDa) is encoded by the human F2 gene. This protein plays a role in both coagulation and proteolysis of fibrinogen.

DesignNote

Prothrombin activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. (UniProt)

Prothrombin catalyzes the cleavage of Arg-Gly bonds in fibrinogen to form fibrin and release fibrinopeptides A and B. (UniProt)

Prothrombin protein can be cleaved into the following 4 chains: activation peptide fragment 1, activation peptide fragment 2, thrombin light chain, thrombin heavy chain. (UniProt)

Prior to secretion, prothrombin is modified to have gamma-carboxyglutamyl residues, resulting from the carboxylation of glutamyl residues by vitamin K-dependent gamma-carboxylase. These modified residues are necessary for the calcium-dependent interaction with a negatively charged phospholipid surface, which is essential for the conversion of prothrombin to thrombin. (UniProt)

FULL_SYN

EC 3.4.21.5

Coagulation Factor II

Factor II

label

Prothrombin

Legacy_Concept_Name

Prothrombin_Gene_Product

NCI_META_CUI

CL449006

OMIM_Number

176930

Preferred_Name

Prothrombin

prefixIRI

C82854

prefLabel

Prothrombin

Semantic_Type

Enzyme

Amino Acid, Peptide, or Protein

Swiss_Prot

P00734

subClassOf

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C101803

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http://purl.obolibrary.org/obo/CHEBI_8583 Chemical Entities of Biological Interest Ontology LOOM
http://purl.obolibrary.org/obo/PR_000007299 International Classification of Diseases Ontology LOOM
http://purl.obolibrary.org/obo/PR_000007299 Protein Ontology LOOM
http://purl.obolibrary.org/obo/PR_000007299 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) LOOM
http://purl.bioontology.org/ontology/LNC/LP16010-8 Logical Observation Identifier Names and Codes LOOM
http://purl.bioontology.org/ontology/MESH/D011516 Medical Subject Headings LOOM