Molecular Interactions Controlled Vocabulary

Last uploaded: November 27, 2019
Preferred Name

electrophoretic mobility shift assay

Synonyms

band shift

emsa

Gel retardation assay

Definitions

This method proves the interaction between a nucleic acid and a protein partner. On the same electrophoresis gel 1 lane is loaded with a nucleic acid of known sequence, a second lane is loaded with the same nucleic acid together with a purified protein (or a protein mixture). The nucleic acid is often radio-labelled to enable visualisation by autoradiography. Comparison of the nucleic acid migration in the two lanes enables the retardation of the nucleic acid due to its interaction with a protein to be observed.

ID

http://purl.obolibrary.org/obo/MI_0413

definition

This method proves the interaction between a nucleic acid and a protein partner. On the same electrophoresis gel 1 lane is loaded with a nucleic acid of known sequence, a second lane is loaded with the same nucleic acid together with a purified protein (or a protein mixture). The nucleic acid is often radio-labelled to enable visualisation by autoradiography. Comparison of the nucleic acid migration in the two lanes enables the retardation of the nucleic acid due to its interaction with a protein to be observed.

has_exact_synonym

band shift

emsa

Gel retardation assay

has_obo_namespace

PSI-MI

id

MI:0413

in_subset

http://purl.obolibrary.org/obo/mi#PSI-MI_slim

label

electrophoretic mobility shift assay

notation

MI:0413

prefLabel

electrophoretic mobility shift assay

treeView

http://purl.obolibrary.org/obo/MI_0807

subClassOf

http://purl.obolibrary.org/obo/MI_0807

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http://purl.bioontology.org/ontology/MESH/D024202 Medical Subject Headings LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C19362 National Cancer Institute Thesaurus LOOM
http://purl.obolibrary.org/obo/OBI_0001671 Ontology for Biomedical Investigations LOOM