Pathway Ontology

Last uploaded: January 13, 2022
Preferred Name

nucleotide excision repair pathway

Synonyms

NER pathway

Nucleotide Excision Repair

Definitions

Nucleotide excision repair pathway is an important mechanism for the detection of helix distorting base alterations. Unlike the base excision repair pathway that only removes the damaged bases, the NER pathway removes an entire lesion containing segment. The single-strand gap thus introduced is filled in by DNA polymerase using the undamaged strand as a template. The pathway can be subdivided into two sub-pathways: the transcription-coupled and the global genome repair. They only differ in the lesion recognition step while the core repair component is common.

ID

http://purl.obolibrary.org/obo/PW_0000130

definition

Nucleotide excision repair pathway is an important mechanism for the detection of helix distorting base alterations. Unlike the base excision repair pathway that only removes the damaged bases, the NER pathway removes an entire lesion containing segment. The single-strand gap thus introduced is filled in by DNA polymerase using the undamaged strand as a template. The pathway can be subdivided into two sub-pathways: the transcription-coupled and the global genome repair. They only differ in the lesion recognition step while the core repair component is common.

has_alternative_id

KEGG:03420

Reactome:R-HSA-5696398

SMP:00478

has_obo_namespace

pathway

has_related_synonym

NER pathway

Nucleotide Excision Repair

id

PW:0000130

label

nucleotide excision repair pathway

notation

PW:0000130

prefLabel

nucleotide excision repair pathway

treeView

http://purl.obolibrary.org/obo/PW_0000661

subClassOf

http://purl.obolibrary.org/obo/PW_0000661

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http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C91447 National Cancer Institute Thesaurus LOOM