loading...| Preferred Name |
5-(hydroxymethyl)cytosine |
| Synonyms |
4-amino-5-(hydroxymethyl)pyrimidin-2(1H)-one 4-Amino-5-(hydroxymethyl)-2(1H)-pyrimidinone 5-hydroxymethylcytosine |
| Definitions |
A nucleobase analogue that is cytosine in which the hydrogen at position 5 is replaced by a hydroxymethyl group. |
| ID |
http://purl.obolibrary.org/obo/CHEBI_76792 |
| charge |
0 |
| database_cross_reference |
Wikipedia:5-Hydroxymethylcytosine PMID:26715454 PMID:26851753 Reaxys:125478 PMID:21151123 PMID:24162993 PMID:24162071 MetaCyc:CPD-15531 PMID:24400731 PMID:24315686 PMID:26753520 PMID:19372391 CAS:1123-95-1 PMID:24295785 PMID:24390216 PMID:21778364 PMID:27001475 |
| definition |
A nucleobase analogue that is cytosine in which the hydrogen at position 5 is replaced by a hydroxymethyl group. |
| formula |
C5H7N3O2 |
| has functional parent | |
| has role | |
| has_exact_synonym |
4-amino-5-(hydroxymethyl)pyrimidin-2(1H)-one |
| has_obo_namespace |
chebi_ontology |
| has_related_synonym |
4-Amino-5-(hydroxymethyl)-2(1H)-pyrimidinone 5-hydroxymethylcytosine |
| id |
CHEBI:76792 |
| in_subset | |
| inchi |
InChI=1S/C5H7N3O2/c6-4-3(2-9)1-7-5(10)8-4/h1,9H,2H2,(H3,6,7,8,10) |
| inchikey |
RYVNIFSIEDRLSJ-UHFFFAOYSA-N |
| label |
5-(hydroxymethyl)cytosine |
| mass |
141.12800 |
| monoisotopicmass |
141.054 |
| notation |
CHEBI:76792 |
| prefLabel |
5-(hydroxymethyl)cytosine |
| smiles |
Nc1nc(=O)[nH]cc1CO |
| treeView |
http://purl.obolibrary.org/obo/CHEBI_38337 http://purl.obolibrary.org/obo/CHEBI_67142 |
| subClassOf |
http://purl.obolibrary.org/obo/CHEBI_38337 http://purl.obolibrary.org/obo/CHEBI_67142 |
| Delete | Mapping To | Ontology | Source |
|---|---|---|---|
| http://purl.obolibrary.org/obo/SO_0001960 | Sequence Types and Features Ontology | LOOM | |
| http://purl.bioontology.org/ontology/MESH/C011865 | Medical Subject Headings | LOOM |