Preferred Name

5-formylcytosine

Synonyms

4-amino-2-oxo-1,2-dihydropyrimidine-5-carbaldehyde

4-amino-2-oxopyrimidine-5-carbaldehyde

cytosine-5-carbaldehyde

Definitions

A nucleobase analogue that is cytosine in which the hydrogen at position 5 is replaced by a formyl group.

ID

http://purl.obolibrary.org/obo/CHEBI_76794

charge

0

database_cross_reference

PMID:22820989

PMID:24335252

PMID:24063363

PMID:24162071

PMID:23602152

Reaxys:7019680

PMID:23602153

PMID:24400731

PMID:24045206

PMID:23512548

PMID:23912899

PMID:21778364

PMID:23629475

PMID:24008380

PMID:24413472

PMID:23932479

PMID:24042448

definition

A nucleobase analogue that is cytosine in which the hydrogen at position 5 is replaced by a formyl group.

formula

C5H5N3O2

has functional parent

http://purl.obolibrary.org/obo/CHEBI_16040

has role

http://purl.obolibrary.org/obo/CHEBI_25212

has_exact_synonym

4-amino-2-oxo-1,2-dihydropyrimidine-5-carbaldehyde

has_obo_namespace

chebi_ontology

has_related_synonym

4-amino-2-oxopyrimidine-5-carbaldehyde

cytosine-5-carbaldehyde

id

CHEBI:76794

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C5H5N3O2/c6-4-3(2-9)1-7-5(10)8-4/h1-2H,(H3,6,7,8,10)

inchikey

FHSISDGOVSHJRW-UHFFFAOYSA-N

label

5-formylcytosine

mass

139.11210

monoisotopicmass

139.038

notation

CHEBI:76794

prefLabel

5-formylcytosine

smiles

Nc1nc(=O)[nH]cc1C=O

treeView

http://purl.obolibrary.org/obo/CHEBI_38337

http://purl.obolibrary.org/obo/CHEBI_67142

http://purl.obolibrary.org/obo/CHEBI_49104

http://purl.obolibrary.org/obo/CHEBI_38338

subClassOf

http://purl.obolibrary.org/obo/CHEBI_38337

http://purl.obolibrary.org/obo/CHEBI_67142

http://purl.obolibrary.org/obo/CHEBI_49104

http://purl.obolibrary.org/obo/CHEBI_38338

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Delete Mapping To Ontology Source
http://purl.bioontology.org/ontology/MESH/C560973 Medical Subject Headings LOOM
http://purl.obolibrary.org/obo/SO_0001961 Sequence Types and Features Ontology LOOM