Ontology for Biomedical Investigations

Last uploaded: January 23, 2019
Preferred Name

organization

Definitions

An entity that can bear roles, has members, and has a set of organization rules. Members of organizations are either organizations themselves or individual people. Members can bear specific organization member roles that are determined in the organization rules. The organization rules also determine how decisions are made on behalf of the organization by the organization members.

ID

http://purl.obolibrary.org/obo/OBI_0000245

definition source

GROUP: OBI

editor note

BP: The definition summarizes long email discussions on the OBI developer, roles, biomaterial and denrie branches. It leaves open if an organization is a material entity or a dependent continuant, as no consensus was reached on that. The current placement as material is therefore temporary, in order to move forward with development. Here is the entire email summary, on which the definition is based: 1) there are organization_member_roles (president, treasurer, branch editor), with individual persons as bearers 2) there are organization_roles (employer, owner, vendor, patent holder) 3) an organization has a charter / rules / bylaws, which specify what roles there are, how they should be realized, and how to modify the charter/rules/bylaws themselves. It is debatable what the organization itself is (some kind of dependent continuant or an aggregate of people). This also determines who/what the bearer of organization_roles' are. My personal favorite is still to define organization as a kind of 'legal entity', but thinking it through leads to all kinds of questions that are clearly outside the scope of OBI. Interestingly enough, it does not seem to matter much where we place organization itself, as long as we can subclass it (University, Corporation, Government Agency, Hospital), instantiate it (Affymetrix, NCBI, NIH, ISO, W3C, University of Oklahoma), and have it play roles. This leads to my proposal: We define organization through the statements 1 - 3 above, but without an 'is a' statement for now. We can leave it in its current place in the is_a hierarchy (material entity) or move it up to 'continuant'. We leave further clarifications to BFO, and close this issue for now.

editor preferred label

organization

example of usage

PMID: 16353909.AAPS J. 2005 Sep 22;7(2):E274-80. Review. The joint food and agriculture organization of the United Nations/World Health Organization Expert Committee on Food Additives and its role in the evaluation of the safety of veterinary drug residues in foods.

has curation status

http://purl.obolibrary.org/obo/IAO_0000122

label

organization

prefixIRI

OBI:0000245

prefLabel

organization

term editor

PERSON: Alan Ruttenberg

PERSON: Bjoern Peters

PERSON: Susanna Sansone

PERSON: Philippe Rocca-Serra

textual definition

An entity that can bear roles, has members, and has a set of organization rules. Members of organizations are either organizations themselves or individual people. Members can bear specific organization member roles that are determined in the organization rules. The organization rules also determine how decisions are made on behalf of the organization by the organization members.

subClassOf

http://purl.obolibrary.org/obo/BFO_0000040

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http://purl.bioontology.org/ontology/LNC/MTHU034822 Logical Observation Identifier Names and Codes LOOM
http://xmlns.com/foaf/0.1/Organization A formal representation of the knowledge within the domain of Isotopes for Food Science LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C92453 National Cancer Institute Thesaurus LOOM
http://purl.obolibrary.org/obo/OBI_0000245 International Classification of Diseases Ontology LOOM
http://purl.obolibrary.org/obo/OBI_0000245 International Classification of Diseases Ontology SAME_URI
http://purl.obolibrary.org/obo/OBI_0000245 GenEpiO LOOM
http://purl.obolibrary.org/obo/OBI_0000245 GenEpiO SAME_URI
http://purl.obolibrary.org/obo/OBI_0000245 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) LOOM
http://purl.obolibrary.org/obo/OBI_0000245 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) SAME_URI
http://purl.obolibrary.org/obo/OBI_0000245 Cell Line Ontology (Chinese Translation) SAME_URI
http://purl.obolibrary.org/obo/OBI_0000245 Evidence and Conclusion Ontology LOOM
http://purl.obolibrary.org/obo/OBI_0000245 Evidence and Conclusion Ontology SAME_URI
http://purl.obolibrary.org/obo/OBI_0000245 Informed Consent Ontology LOOM
http://purl.obolibrary.org/obo/OBI_0000245 Informed Consent Ontology SAME_URI
http://purl.obolibrary.org/obo/OBI_0000245 Environment Ontology LOOM
http://purl.obolibrary.org/obo/OBI_0000245 Environment Ontology SAME_URI
http://purl.bioontology.org/ontology/STY/T092 MedlinePlus Health Topics LOOM
http://purl.bioontology.org/ontology/STY/T092 Logical Observation Identifier Names and Codes LOOM
http://purl.bioontology.org/ontology/STY/T092 International Classification of Diseases, Version 10 - Clinical Modification LOOM
http://purl.bioontology.org/ontology/STY/T092 Medical Subject Headings LOOM
http://purl.bioontology.org/ontology/STY/T092 Online Mendelian Inheritance in Man LOOM
http://purl.bioontology.org/ontology/STY/T092 Semantic Types Ontology LOOM
http://purl.bioontology.org/ontology/LNC/LP96544-9 Logical Observation Identifier Names and Codes LOOM
http://semanticscience.org/resource/SIO_000012 Semanticscience Integrated Ontology LOOM