Ontology for Biomedical Investigations

Last uploaded: January 23, 2019

Preferred Name	chromatin immunoprecipitation with exonuclease sequencing assay
Definitions	A ChIP-seq assay which uses immunoprecipitation to isolate protein bound DNA followed by an exonuclease step to degrade DNA that is not protein bound to provide greater resolution of the DNA binding site
ID	http://purl.obolibrary.org/obo/OBI_0001925
alternative term	ChIP-exo assay
definition source	PMID:22153082
editor preferred label	chromatin immunoprecipitation with exonuclease sequencing assay
example of usage	Rhee et al. Comprehensive Genome-wide Protein-DNA Interactions Detected at Single-Nucleotide Resolution. Cell. 2011 Dec;147(6):1408-19. [PMID:22153082]
has curation status	http://purl.obolibrary.org/obo/IAO_0000120
has part	http://purl.obolibrary.org/obo/OBI_0600050 http://purl.obolibrary.org/obo/OBI_0000800
has_specified_output	http://purl.obolibrary.org/obo/OBI_0001573
label	chromatin immunoprecipitation with exonuclease sequencing assay
prefixIRI	OBI:0001925
prefLabel	chromatin immunoprecipitation with exonuclease sequencing assay
term editor	Bjoern Peters Chris Stoeckert Venkat Malladi Jie Zheng
textual definition	A ChIP-seq assay which uses immunoprecipitation to isolate protein bound DNA followed by an exonuclease step to degrade DNA that is not protein bound to provide greater resolution of the DNA binding site
subClassOf	http://purl.obolibrary.org/obo/OBI_0000716

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Delete	Mapping To	Ontology	Source
	http://purl.obolibrary.org/obo/OBI_0001925	Evidence and Conclusion Ontology	LOOM
	http://purl.obolibrary.org/obo/OBI_0001925	Evidence and Conclusion Ontology	SAME_URI