Phenotypic Quality Ontology

Last uploaded: March 1, 2022
Preferred Name

CD34 molecule

Synonyms

hematopoietic progenitor cell antigen CD34

CD34

Definitions

Category=gene. Requested by=CL. A protein that is a translation product of the human CD34 gene or a 1:1 ortholog thereof. It is a leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. It contains a single-pass transmembrane domain and that show distinct expression on early hematopoietic precursors and vascular-associated tissue. Acts as a scaffold that presents selectin carbohydrate ligands in a clustered, tissue specific manner to allow for higher avidity interactions between leukocytes and endothelial cells during the inflammatory process. In common with related sialomucins (endoglycan and podocalyxin), the extracellular region is dominated by an N-terminal mucin-like domain, which is densely substituted with sialylated O-linked carbohydrates. The mucin-like region is followed by a cysteine-containing and presumably globular domain. This domain may fold into an immunoglobulin-like structure as the positions of 2 of the cysteines are conserved in the C2 set of the immunoglobulin superfamily. The cytoplasmic domain is around 73-76 residues long and highly conserved.

ID

http://purl.obolibrary.org/obo/PR_000001003

comment

Category=gene. Requested by=CL.

database_cross_reference

PIRSF:PIRSF028749

definition

A protein that is a translation product of the human CD34 gene or a 1:1 ortholog thereof. It is a leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. It contains a single-pass transmembrane domain and that show distinct expression on early hematopoietic precursors and vascular-associated tissue. Acts as a scaffold that presents selectin carbohydrate ligands in a clustered, tissue specific manner to allow for higher avidity interactions between leukocytes and endothelial cells during the inflammatory process. In common with related sialomucins (endoglycan and podocalyxin), the extracellular region is dominated by an N-terminal mucin-like domain, which is densely substituted with sialylated O-linked carbohydrates. The mucin-like region is followed by a cysteine-containing and presumably globular domain. This domain may fold into an immunoglobulin-like structure as the positions of 2 of the cysteines are conserved in the C2 set of the immunoglobulin superfamily. The cytoplasmic domain is around 73-76 residues long and highly conserved.

has_exact_synonym

hematopoietic progenitor cell antigen CD34

CD34

has_obo_namespace

protein

id

PR:000001003

label

CD34 molecule

notation

PR:000001003

prefLabel

CD34 molecule

subClassOf

http://purl.obolibrary.org/obo/CHEBI_36080

http://purl.obolibrary.org/obo/PR_000000001

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http://purl.obolibrary.org/obo/PR_000001003 Cell Ontology LOOM
http://purl.obolibrary.org/obo/PR_000001003 Cell Ontology SAME_URI
http://purl.obolibrary.org/obo/PR_000001003 Protein Ontology LOOM
http://purl.obolibrary.org/obo/PR_000001003 Protein Ontology SAME_URI
http://purl.obolibrary.org/obo/PR_000001003 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) LOOM
http://purl.obolibrary.org/obo/PR_000001003 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) SAME_URI
http://purl.obolibrary.org/obo/PR_000001003 Cell Line Ontology (Chinese Translation) SAME_URI