Phenotypic Quality Ontology

Last uploaded: March 1, 2022
Preferred Name

molecular_function

Synonyms

molecular function

Definitions

Note that, in addition to forming the root of the molecular function ontology, this term is recommended for use for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. Despite its name, this is not a type of 'function' in the sense typically defined by upper ontologies such as Basic Formal Ontology (BFO). It is instead a BFO:process carried out by a single gene product or complex. A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process.

ID

http://purl.obolibrary.org/obo/GO_0003674

comment

Note that, in addition to forming the root of the molecular function ontology, this term is recommended for use for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. Despite its name, this is not a type of 'function' in the sense typically defined by upper ontologies such as Basic Formal Ontology (BFO). It is instead a BFO:process carried out by a single gene product or complex.

definition

A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process.

has_alternative_id

GO:0005554

has_exact_synonym

molecular function

has_obo_namespace

molecular_function

id

GO:0003674

in_subset

http://purl.obolibrary.org/obo/go#goslim_candida

http://purl.obolibrary.org/obo/go#goslim_pir

http://purl.obolibrary.org/obo/go#goslim_yeast

http://purl.obolibrary.org/obo/go#goslim_aspergillus

http://purl.obolibrary.org/obo/go#goslim_plant

http://purl.obolibrary.org/obo/go#goslim_chembl

http://purl.obolibrary.org/obo/go#goslim_metagenomics

label

molecular_function

notation

GO:0003674

prefLabel

molecular_function

disjointWith

http://purl.obolibrary.org/obo/GO_0005575

http://purl.obolibrary.org/obo/GO_0008150

subClassOf

http://purl.obolibrary.org/obo/BFO_0000015

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http://purl.bioontology.org/ontology/STY/T044 MedlinePlus Health Topics LOOM
http://purl.bioontology.org/ontology/STY/T044 Logical Observation Identifier Names and Codes LOOM
http://purl.bioontology.org/ontology/STY/T044 International Classification of Diseases, Version 10 - Clinical Modification LOOM
http://purl.bioontology.org/ontology/STY/T044 Medical Subject Headings LOOM
http://purl.bioontology.org/ontology/STY/T044 Online Mendelian Inheritance in Man LOOM
http://purl.bioontology.org/ontology/STY/T044 Semantic Types Ontology LOOM
http://purl.obolibrary.org/obo/GO_0003674 Human Phenotype Ontology China LOOM
http://purl.obolibrary.org/obo/GO_0003674 Human Phenotype Ontology China SAME_URI
http://purl.obolibrary.org/obo/GO_0003674 Relations Ontology LOOM
http://purl.obolibrary.org/obo/GO_0003674 Relations Ontology SAME_URI
http://purl.obolibrary.org/obo/GO_0003674 International Classification of Diseases Ontology LOOM
http://purl.obolibrary.org/obo/GO_0003674 International Classification of Diseases Ontology SAME_URI
http://purl.obolibrary.org/obo/GO_0003674 Cell Ontology LOOM
http://purl.obolibrary.org/obo/GO_0003674 Cell Ontology SAME_URI
http://purl.obolibrary.org/obo/GO_0003674 Gene Ontology LOOM
http://purl.obolibrary.org/obo/GO_0003674 Gene Ontology SAME_URI
http://purl.obolibrary.org/obo/GO_0003674 Evidence and Conclusion Ontology LOOM
http://purl.obolibrary.org/obo/GO_0003674 Evidence and Conclusion Ontology SAME_URI
http://purl.obolibrary.org/obo/GO_0003674 Ontology for Biomedical Investigations SAME_URI
http://purl.obolibrary.org/obo/GO_0003674 Environment Ontology LOOM
http://purl.obolibrary.org/obo/GO_0003674 Environment Ontology SAME_URI
http://purl.org/obo/owl/GO#GO_0003674 MicroRNA Ontology LOOM
http://purl.obolibrary.org/obo/MI_0355 Molecular Interactions Controlled Vocabulary LOOM