Phenotypic Quality Ontology

Last uploaded: March 1, 2022
Preferred Name

signal transduction

Synonyms

signal transduction by conformational transition

signal transduction by cis-phosphorylation

signalling pathway

signal transduction by trans-phosphorylation

signaling pathway

signal transduction by protein phosphorylation

signalling cascade

signaling cascade

Definitions

Note that signal transduction is defined broadly to include a ligand interacting with a receptor, downstream signaling steps and a response being triggered. A change in form of the signal in every step is not necessary. Note that in many cases the end of this process is regulation of the initiation of transcription. Note that specific transcription factors may be annotated to this term, but core/general transcription machinery such as RNA polymerase should not. The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

ID

http://purl.obolibrary.org/obo/GO_0007165

comment

Note that signal transduction is defined broadly to include a ligand interacting with a receptor, downstream signaling steps and a response being triggered. A change in form of the signal in every step is not necessary. Note that in many cases the end of this process is regulation of the initiation of transcription. Note that specific transcription factors may be annotated to this term, but core/general transcription machinery such as RNA polymerase should not.

database_cross_reference

Wikipedia:Signal_transduction

definition

The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

has_alternative_id

GO:0023015

GO:0023014

GO:0023033

GO:0023016

GO:0023045

has_narrow_synonym

signal transduction by conformational transition

signal transduction by cis-phosphorylation

signal transduction by trans-phosphorylation

signal transduction by protein phosphorylation

signalling cascade

signaling cascade

has_obo_namespace

biological_process

has_related_synonym

signalling pathway

signaling pathway

id

GO:0007165

in_subset

http://purl.obolibrary.org/obo/go#goslim_candida

http://purl.obolibrary.org/obo/go#goslim_aspergillus

http://purl.obolibrary.org/obo/go#goslim_plant

http://purl.obolibrary.org/obo/go#goslim_chembl

http://purl.obolibrary.org/obo/go#goslim_metagenomics

label

signal transduction

notation

GO:0007165

part_of

http://purl.obolibrary.org/obo/GO_0007154

http://purl.obolibrary.org/obo/GO_0023052

http://purl.obolibrary.org/obo/GO_0051716

prefLabel

signal transduction

treeView

http://purl.obolibrary.org/obo/GO_0007154

http://purl.obolibrary.org/obo/GO_0023052

http://purl.obolibrary.org/obo/GO_0051716

subClassOf

http://purl.obolibrary.org/obo/GO_0050794

http://purl.obolibrary.org/obo/GO_0009987

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Delete Mapping To Ontology Source
http://purl.bioontology.org/ontology/MESH/D015398 Medical Subject Headings LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17133 National Cancer Institute Thesaurus LOOM
http://purl.obolibrary.org/obo/GO_0007165 Human Phenotype Ontology China LOOM
http://purl.obolibrary.org/obo/GO_0007165 Human Phenotype Ontology China SAME_URI
http://purl.obolibrary.org/obo/GO_0007165 International Classification of Diseases Ontology LOOM
http://purl.obolibrary.org/obo/GO_0007165 International Classification of Diseases Ontology SAME_URI
http://purl.obolibrary.org/obo/GO_0007165 Cell Ontology LOOM
http://purl.obolibrary.org/obo/GO_0007165 Cell Ontology SAME_URI
http://purl.obolibrary.org/obo/GO_0007165 Gene Ontology LOOM
http://purl.obolibrary.org/obo/GO_0007165 Gene Ontology SAME_URI