Sequence Types and Features Ontology

Last uploaded: January 23, 2019
Preferred Name

polypeptide

Synonyms

protein

Definitions

This term is mapped to MGED. Do not obsolete without consulting MGED ontology. The term 'protein' was merged with 'polypeptide'. Although 'protein' was a sequence_attribute and therefore meant to describe the quality rather than an actual feature, it was being used erroneously. It is replaced by 'peptidyl' as the polymer attribute. A sequence of amino acids linked by peptide bonds which may lack appreciable tertiary structure and may not be liable to irreversible denaturation.

ID

http://purl.obolibrary.org/obo/SO_0000104

comment

This term is mapped to MGED. Do not obsolete without consulting MGED ontology. The term 'protein' was merged with 'polypeptide'. Although 'protein' was a sequence_attribute and therefore meant to describe the quality rather than an actual feature, it was being used erroneously. It is replaced by 'peptidyl' as the polymer attribute.

database_cross_reference

http://en.wikipedia.org/wiki/Polypeptide

definition

A sequence of amino acids linked by peptide bonds which may lack appreciable tertiary structure and may not be liable to irreversible denaturation.

derives_from

http://purl.obolibrary.org/obo/SO_0000316

has_alternative_id

SO:0000358

has_exact_synonym

protein

has_obo_namespace

sequence

id

SO:0000104

in_subset

http://purl.obolibrary.org/obo/so#SOFA

label

polypeptide

notation

SO:0000104

prefLabel

polypeptide

subClassOf

http://purl.obolibrary.org/obo/SO_0001411

Delete Subject Author Type Created
No notes to display
Create New Mapping

Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/SO_0000104 Ontology for Biomedical Investigations LOOM
http://purl.obolibrary.org/obo/SO_0000104 Ontology for Biomedical Investigations SAME_URI
http://semanticscience.org/resource/SIO_010007 Semanticscience Integrated Ontology LOOM
http://purl.bioontology.org/ontology/LNC/LP28763-8 Logical Observation Identifier Names and Codes LOOM
http://purl.obolibrary.org/obo/CHEBI_15841 Chemical Entities of Biological Interest Ontology LOOM
http://purl.obolibrary.org/obo/CHEBI_15841 Human Phenotype Ontology China LOOM
http://purl.obolibrary.org/obo/CHEBI_15841 Phenotypic Quality Ontology LOOM
http://purl.obolibrary.org/obo/CHEBI_15841 GenEpiO LOOM
http://purl.obolibrary.org/obo/CHEBI_15841 Cell Ontology LOOM