Cell Ontology

Last uploaded: February 23, 2022
Preferred Name

basal ganglion

Synonyms

basal ganglion of telencephalon

basal nucleus

basal ganglia

nuclei basales

Definitions

An individual member of a collection of basal ganglia. Basal ganglia are subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum[NIF,modified].

ID

http://purl.obolibrary.org/obo/UBERON_0002420

database_cross_reference

BTO:0000235

EFO:0000904

DHBA:10332

SCTID:244434001

FMA:62514

CALOHA:TS-1149

definition

An individual member of a collection of basal ganglia. Basal ganglia are subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum[NIF,modified].

depicted by

http://upload.wikimedia.org/wikipedia/commons/1/1b/Basal_Ganglia_and_Related_Structures.svg

editor note

it is necessary to introduce two classes, one representing an individual basal ganglion, another representing the aggregate structure, in order to have consistent classification amongst AOs (e.g. in MA the aygdala is part of the BG, in FMA and BTO it is a subclass). Apart from achieving this consistency, the value of having two distinct classes is questionable, since the BG-plural is trivially the set of all BGs-singular. it would be better for all AOs to decide on one single way of doing this. Do not merge until this is done.

has_exact_synonym

basal ganglion of telencephalon

has_obo_namespace

uberon

has_related_synonym

basal nucleus

basal ganglia

nuclei basales

id

UBERON:0002420

in_subset

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#efo_slim

label

basal ganglion

notation

UBERON:0002420

part_of

http://purl.obolibrary.org/obo/UBERON_0010011

prefLabel

basal ganglion

treeView

http://purl.obolibrary.org/obo/UBERON_0010011

subClassOf

http://purl.obolibrary.org/obo/UBERON_0003528

http://purl.obolibrary.org/obo/UBERON_0007245

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http://purl.obolibrary.org/obo/UBERON_0002420 Human Phenotype Ontology China LOOM
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http://purl.obolibrary.org/obo/UBERON_0002420 Uber Anatomy Ontology LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 Uber Anatomy Ontology SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 Environment Ontology LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 Environment Ontology SAME_URI
http://purl.obolibrary.org/obo/BTO_0000235 BRENDA Tissue and Enzyme Source Ontology LOOM