Phenotypic Quality Ontology

Last uploaded: March 1, 2022
Preferred Name

brainstem

Synonyms

brain stem

lamina medullaris incompleta pallidi

lamella pallidi incompleta

accessory medullary lamina of pallidum

lamina pallidi incompleta

lamina medullaris accessoria

truncus encephali

truncus encephalicus

Definitions

Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,MP,generalized]. 'brainstem' is a loose term that sometimes refers to the ventral parts o the brain except for any part of the telencephalon - sometimes it includes the diencephalon or subpallial telencephalon structures (ISBN:0471888893). Here we use it in a more restriced sense, to include only the medulla oblongata, pons (when present) and the midbrain tegmentum (following the ZFA definitions).

ID

http://purl.obolibrary.org/obo/UBERON_0002298

comment

'brainstem' is a loose term that sometimes refers to the ventral parts o the brain except for any part of the telencephalon - sometimes it includes the diencephalon or subpallial telencephalon structures (ISBN:0471888893). Here we use it in a more restriced sense, to include only the medulla oblongata, pons (when present) and the midbrain tegmentum (following the ZFA definitions).

continuous_with

http://purl.obolibrary.org/obo/UBERON_0002240

contributes to morphology of

http://purl.obolibrary.org/obo/UBERON_0000955

database_cross_reference

UMLS:C0006121

EMAPA:32678

EFO:0001962

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=236

TAO:0002156

BIRNLEX:1565

MESH:D001933

BAMS:BS

ZFA:0001707

SCTID:180925009

Wikipedia:Brainstem

BTO:0000146

MBA:343

EV:0100241

VHOG:0001457

FMA:79876

NCIT:C12441

MA:0000169

CALOHA:TS-0093

definition

Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,MP,generalized].

depicted_by

http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png

has part

http://purl.obolibrary.org/obo/UBERON_0001943

http://purl.obolibrary.org/obo/UBERON_0001896

has_exact_synonym

brain stem

truncus encephali

has_obo_namespace

uberon

has_related_synonym

lamina medullaris incompleta pallidi

lamella pallidi incompleta

accessory medullary lamina of pallidum

lamina pallidi incompleta

lamina medullaris accessoria

truncus encephalicus

id

UBERON:0002298

in_subset

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

label

brainstem

notation

UBERON:0002298

prefLabel

brainstem

RO_0002171

http://purl.obolibrary.org/obo/UBERON_0002314

http://purl.obolibrary.org/obo/UBERON_0001890

http://purl.obolibrary.org/obo/UBERON_0002037

UBPROP_0000001

Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,adopted][ZFA:0001707].

the stalk-like part of the brain that comprises the midbrain (aka mesencephalon), the pons (aka pons Varolii), and the medulla oblongata, and connects the cerebral hemispheres with the cervical spinal cord[MP]

Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain.[TAO]

subClassOf

http://purl.obolibrary.org/obo/UBERON_0002616

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