Uber Anatomy Ontology

Last uploaded: January 20, 2022
Preferred Name

brain

Synonyms

suprasegmental structures

encephalon

suprasegmental levels of nervous system

synganglion

the brain

Definitions

The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP].

ID

http://purl.obolibrary.org/obo/UBERON_0000955

contributes to morphology of

http://purl.obolibrary.org/obo/UBERON_0001016

contributor

https://github.com/cmungall

database_cross_reference

BTO:0000142

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=21

BILA:0000135

ABA:Brain

GAID:571

FMA:50801

OpenCyc:Mx4rvVjT65wpEbGdrcN5Y29ycA

EFO:0000302

BAMS:Br

EMAPA:16894

EHDAA:6485

MAT:0000098

PBA:3999

MA:0000168

EHDAA:2641

EV:0100164

MBA:997

MIAA:0000098

MESH:D001921

TAO:0000008

HBA:4005

UMLS:C1269537

galen:Brain

UMLS:C0006104

CALOHA:TS-0095

XAO:0000010

EHDAA2:0000183

BAMS:Brain

MBA:8

VHOG:0000157

NCIT:C12439

ZFA:0000008

AAO:0010478

FBbt:00005095

DHBA:10155

http://uri.neuinfo.org/nif/nifstd/birnlex_796

http://linkedlifedata.com/resource/umls/id/C0006104

http://linkedlifedata.com/resource/umls/id/C1269537

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=21

http://en.wikipedia.org/wiki/Brain

http://www.snomedbrowser.com/Codes/Details/258335003

definition

The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP].

develops_from

http://purl.obolibrary.org/obo/UBERON_0006238

editor note

requires review for applicability to invertebrate structures, e.g. synganglion

existence ends during

http://purl.obolibrary.org/obo/UBERON_0000066

external_definition

Part of the central nervous system situated within the cranium and composed of both nerve cell bodies and nerve fibers.[AAO]

The part of the central nervous system contained within the cranium, comprising the forebrain, midbrain, hindbrain, and metencephalon. It is derived from the anterior part of the embryonic neural tube (or the encephalon). Does not include retina. (CUMBO)

Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system.[TAO]

has_obo_namespace

uberon

has_related_synonym

suprasegmental structures

encephalon

suprasegmental levels of nervous system

synganglion

the brain

homology_notes

(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...) (reference 1); The neural tube is destined to differentiate into the brain and spinal cord (the central nervous system) (reference 2).[well established][VHOG]

id

UBERON:0000955

immediate transformation of

http://purl.obolibrary.org/obo/UBERON_0006238

in_anterior_side_of

http://purl.obolibrary.org/obo/UBERON_0000468

in_subset

http://purl.obolibrary.org/obo/uberon/core#major_organ

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#cumbo

label

brain

notation

UBERON:0000955

part_of

http://purl.obolibrary.org/obo/UBERON_0001017

prefLabel

brain

treeView

http://purl.obolibrary.org/obo/UBERON_0006238

http://purl.obolibrary.org/obo/UBERON_0001017

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000062

http://purl.obolibrary.org/obo/UBERON_0004121

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Delete Mapping To Ontology Source
http://purl.bmicc.cn/ontology/ICD11CN/XA9738 International Classification of Diseases, 11th Edition, China LOOM
http://purl.obolibrary.org/obo/FMA_50801 Foundational Model of Anatomy LOOM
http://purl.bioontology.org/ontology/LNC/MTHU002079 Logical Observation Identifier Names and Codes LOOM
http://purl.obolibrary.org/obo/BTO_0000142 BRENDA Tissue and Enzyme Source Ontology LOOM
http://purl.bioontology.org/ontology/MESH/D001921 Medical Subject Headings LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12439 National Cancer Institute Thesaurus LOOM
http://purl.bioontology.org/ontology/LNC/LP206702-5 Logical Observation Identifier Names and Codes LOOM
http://purl.bioontology.org/ontology/LNC/LP7084-9 Logical Observation Identifier Names and Codes LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Human Phenotype Ontology China LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Human Phenotype Ontology China SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 International Classification of Diseases Ontology LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 International Classification of Diseases Ontology SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 Phenotypic Quality Ontology LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Phenotypic Quality Ontology SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 GenEpiO LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 GenEpiO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 Cell Ontology LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Cell Ontology SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 Cell Line Ontology (Chinese Translation) SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 Evidence and Conclusion Ontology LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Evidence and Conclusion Ontology SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 Ontology for Biomedical Investigations LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Ontology for Biomedical Investigations SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 Human Disease Ontology 123 LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Human Disease Ontology 123 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 Informed Consent Ontology LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Informed Consent Ontology SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000955 Environment Ontology LOOM
http://purl.obolibrary.org/obo/UBERON_0000955 Environment Ontology SAME_URI